Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013722.1 Corchorus olitorius cultivar O-4 contig13755, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13466

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--994
332
3.0
330
91
3
1557
34
14
16
35
1.89
996--1024
14
2.1
14
100
0
58
27
44
6
20
1.77
1134--1176
22
1.9
23
85
4
61
37
6
2
53
1.41
1249--1316
33
2.1
33
100
0
136
30
14
5
48
1.68
1587--1669
32
2.6
32
96
0
157
18
55
4
21
1.61
2530--2584
27
2.0
27
92
0
92
41
25
12
20
1.87

Tables:   1

The End!