Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013734.1 Corchorus olitorius cultivar O-4 contig13767, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4194

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2552--2689
39
3.5
39
90
1
204
39
10
21
27
1.87
2640--2984
40
8.7
40
89
2
500
35
9
22
33
1.86
2640--2984
79
4.3
80
91
2
545
35
9
22
33
1.86
2960--3060
39
2.7
37
84
3
121
36
10
24
27
1.89
3290--3415
47
2.7
47
93
0
216
38
19
24
18
1.93
3526--3935
137
3.0
135
83
4
491
25
19
29
26
1.99
3526--3935
69
6.0
68
86
2
489
25
19
29
26
1.99
3692--3975
137
2.1
136
82
2
336
26
20
29
23
1.98

Tables:   1

The End!