Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013737.1 Corchorus olitorius cultivar O-4 contig13770, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45042

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6144--6196
19
2.8
18
76
18
54
16
3
24
54
1.59
9967--10005
20
2.0
20
94
0
69
41
2
17
38
1.64
10384--10423
21
1.9
21
85
10
55
37
2
15
45
1.59
11080--11704
170
3.7
169
86
3
853
19
25
18
36
1.94
11077--11704
43
14.7
43
87
3
833
19
26
18
35
1.95
11726--11841
40
2.9
41
83
5
146
18
21
18
40
1.92
11857--11949
40
2.3
40
96
0
168
10
32
18
38
1.85
14380--14432
27
1.9
28
84
3
72
7
13
1
77
1.06
28721--28762
16
2.5
17
84
3
59
9
7
2
80
0.97
36908--36977
31
2.3
31
97
0
131
20
38
31
10
1.85
41778--41820
21
2.1
20
82
4
50
41
18
25
13
1.88

Tables:   1

The End!