Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013740.1 Corchorus olitorius cultivar O-4 contig13773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52396

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
349--484
68
2.0
68
97
0
254
50
12
15
21
1.76
12635--12686
26
2.0
26
96
0
95
63
0
11
25
1.28
18037--18073
2
18.5
2
100
0
74
48
0
0
51
1.00
22467--22502
2
18.0
2
94
0
63
50
2
0
47
1.15
22502--22957
227
2.0
227
99
0
903
35
14
17
32
1.90
27478--27626
76
2.0
74
92
3
246
28
13
18
39
1.89
31064--31100
19
2.0
19
89
5
58
35
0
0
64
0.94
33598--33641
17
2.6
17
78
3
54
13
6
4
75
1.17
36646--36716
33
2.1
34
89
7
119
14
14
30
40
1.85
38148--38207
30
2.0
30
96
0
111
51
16
25
6
1.68
46535--46575
20
2.0
20
100
0
82
26
19
24
29
1.98
52344--52390
2
23.5
2
100
0
94
51
0
48
0
1.00

Tables:   1

The End!