Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013748.1 Corchorus olitorius cultivar O-4 contig13781, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34337

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1099--1735
68
9.5
68
82
6
664
21
17
16
43
1.88
1440--1566
61
2.1
60
82
5
148
19
20
17
42
1.89
5102--5130
1
29.0
1
100
0
58
100
0
0
0
0.00
6345--6988
68
9.7
68
82
7
664
22
18
15
43
1.88
6821--7045
66
3.4
65
73
9
163
23
23
16
36
1.94
17949--17982
16
2.2
15
89
5
50
58
2
29
8
1.43
17955--18007
16
3.2
16
81
5
52
52
1
37
7
1.41
18986--19021
3
12.0
3
88
11
56
69
0
30
0
0.89
20907--20950
15
2.9
16
80
13
56
6
47
0
45
1.29
21521--21578
17
3.4
17
71
4
53
6
46
8
37
1.61
21520--21588
35
2.0
35
94
0
120
7
46
8
37
1.63
21532--21587
17
3.2
17
70
5
58
8
48
7
35
1.62
27263--27302
2
21.5
2
80
14
50
50
0
0
50
1.00
27260--27298
18
2.1
18
90
4
60
48
0
0
51
1.00
27357--27382
12
2.2
12
100
0
52
42
0
7
50
1.31
31717--31773
28
2.0
28
100
0
114
35
0
36
28
1.58

Tables:   1

The End!