Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013752.1 Corchorus olitorius cultivar O-4 contig13785, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30151

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1128--1165
19
1.9
20
84
10
51
63
10
13
13
1.53
8606--8635
14
2.1
14
93
0
51
60
10
13
16
1.59
15909--16017
42
2.6
42
97
0
200
24
10
32
33
1.89
17235--17367
35
3.8
34
84
3
149
35
16
10
37
1.83
22797--22868
29
2.5
29
81
2
83
45
19
13
20
1.84
22768--22868
28
3.6
28
76
5
87
43
20
14
20
1.87
23030--23059
14
2.1
14
93
0
51
40
3
0
56
1.16

Tables:   1

The End!