Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013765.1 Corchorus olitorius cultivar O-4 contig13798, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25931

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
437--505
36
1.9
35
91
2
111
21
8
8
60
1.53
4120--4168
25
2.0
24
85
14
66
59
2
8
30
1.38
14195--14222
13
2.2
13
100
0
56
46
7
0
46
1.30
14333--14374
19
2.3
18
84
8
57
61
0
4
33
1.17
14338--14374
19
2.0
19
89
5
58
64
0
2
32
1.07
25868--25921
2
27.0
2
100
0
108
50
0
50
0
1.00

Tables:   1

The End!