Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013772.1 Corchorus olitorius cultivar O-4 contig13805, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21599

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24--153
3
43.0
3
98
1
251
33
0
0
66
0.92
1380--1408
5
5.8
5
100
0
58
0
17
0
82
0.66
12973--13005
3
11.0
3
100
0
66
66
0
0
33
0.92
16663--16715
26
2.0
26
100
0
106
7
15
15
62
1.53
17356--17406
16
3.2
15
78
15
50
0
19
1
78
0.85
21348--21526
59
3.0
59
96
0
322
32
17
11
38
1.85

Tables:   1

The End!