Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013774.1 Corchorus olitorius cultivar O-4 contig13807, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12310

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--52
2
26.0
2
100
0
104
50
0
0
50
1.00
6763--6823
31
2.0
31
83
0
77
24
13
9
52
1.70
7332--7406
35
2.1
35
100
0
150
24
17
17
41
1.90
7448--7496
16
3.2
16
80
5
57
57
0
0
42
0.99
7432--7479
19
2.5
19
83
10
62
47
0
0
52
1.00
7432--7486
19
2.9
19
77
17
60
49
0
0
50
1.00
7599--7633
18
1.9
18
94
0
61
28
8
11
51
1.67
9892--9944
11
4.8
11
76
15
56
52
1
0
45
1.11
10307--10332
13
2.0
13
100
0
52
53
30
0
15
1.42

Tables:   1

The End!