Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013790.1 Corchorus olitorius cultivar O-4 contig13823, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18878

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9298--9346
24
2.0
24
92
0
80
30
8
46
14
1.73
9474--9537
30
2.2
30
81
13
80
29
10
14
45
1.78
14464--14505
20
2.1
20
100
0
84
30
4
19
45
1.71
17118--17221
31
3.4
30
70
15
97
34
18
19
27
1.95
17122--17286
60
2.8
60
86
1
242
35
18
18
27
1.94
17358--17456
29
3.3
29
69
15
94
28
23
17
31
1.97
17325--17487
60
2.7
60
93
1
265
27
21
17
33
1.96
17327--17491
31
5.5
29
65
16
86
27
21
17
32
1.96
17616--17643
1
28.0
1
100
0
56
100
0
0
0
0.00
18397--18495
50
2.0
50
90
4
155
37
23
11
28
1.89

Tables:   1

The End!