Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013792.1 Corchorus olitorius cultivar O-4 contig13825, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21943

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2434--2707
107
2.6
105
90
2
417
39
8
9
42
1.68
6177--6210
7
4.9
7
85
0
50
8
5
0
85
0.75
16104--16131
2
14.0
2
100
0
56
50
0
0
50
1.00
18609--18659
12
4.2
12
80
12
50
19
0
1
78
0.85
18628--18659
8
3.9
8
92
8
55
21
0
0
78
0.76
18631--18662
9
3.7
9
91
8
57
21
0
0
78
0.76
18628--18662
17
2.1
17
100
0
70
22
0
0
77
0.78

Tables:   1

The End!