Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013799.1 Corchorus olitorius cultivar O-4 contig13832, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28199

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9262--9300
17
2.4
17
82
4
53
7
7
5
79
1.05
13140--13213
28
2.7
28
89
2
114
36
27
14
21
1.93
13699--13739
21
1.9
22
85
5
57
19
53
26
0
1.45
16686--16721
19
1.9
19
88
5
56
47
2
16
33
1.61
19447--19485
18
2.1
19
85
4
53
25
20
12
41
1.88
26202--26236
3
11.7
3
100
0
70
65
0
0
34
0.93
27834--27858
12
2.1
12
100
0
50
44
8
16
32
1.76

Tables:   1

The End!