Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013800.1 Corchorus olitorius cultivar O-4 contig13833, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46038

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--32
2
15.5
2
100
0
62
51
0
0
48
1.00
8045--8475
68
6.4
68
82
5
511
44
13
19
22
1.86
13143--13178
2
18.0
2
94
0
63
47
0
2
50
1.15
14202--14241
21
1.9
21
85
10
55
55
5
15
25
1.60
14500--14720
110
2.0
110
91
0
361
22
8
25
43
1.81
42138--42688
276
2.0
277
89
1
845
40
14
12
32
1.83
43724--43771
22
2.2
22
88
0
69
45
4
10
39
1.58
43731--43775
22
2.0
22
95
0
81
46
2
11
40
1.52

Tables:   1

The End!