Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013810.1 Corchorus olitorius cultivar O-4 contig13843, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26923

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2799--2904
52
2.0
53
96
1
196
44
10
10
34
1.73
7326--7353
13
2.2
13
100
0
56
21
25
7
46
1.76
11473--11626
45
3.4
45
90
1
184
25
42
2
29
1.68
13289--13322
10
3.3
10
87
4
50
20
2
0
76
0.92
13344--13391
20
2.4
20
92
0
78
16
33
18
31
1.94
15650--15698
26
1.9
24
84
12
62
57
8
12
22
1.61
16437--16462
11
2.4
11
100
0
52
69
7
15
7
1.35
26051--26648
298
2.0
298
98
0
1142
33
8
16
41
1.79

Tables:   1

The End!