Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013811.1 Corchorus olitorius cultivar O-4 contig13844, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12706

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2756--2813
2
31.5
2
75
16
54
46
3
0
50
1.18
2751--2822
32
2.2
33
90
9
112
44
8
0
47
1.33
6348--6386
2
19.5
2
100
0
78
48
0
0
51
1.00
9050--9168
33
3.6
33
88
2
168
15
31
40
12
1.84
9050--9184
33
4.1
33
85
4
166
14
31
38
14
1.87
11205--11246
21
2.0
21
100
0
84
19
19
38
23
1.93
11132--11326
71
2.8
70
86
3
257
22
22
23
31
1.99

Tables:   1

The End!