Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013827.1 Corchorus olitorius cultivar O-4 contig13860, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28386

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
221--1128
416
2.1
424
83
6
1117
30
15
12
40
1.85
2659--2695
16
2.3
16
90
0
56
8
2
45
43
1.47
4436--4490
16
3.5
16
77
5
58
7
10
40
41
1.68
4437--4474
15
2.4
16
86
4
51
5
13
39
42
1.66
11950--11987
20
1.9
20
100
0
76
44
39
5
10
1.61
14320--14372
22
2.4
22
81
6
63
47
0
1
50
1.12
17169--17204
16
2.2
16
90
0
54
22
13
27
36
1.92
25218--25251
11
2.8
12
91
8
52
17
8
11
61
1.54

Tables:   1

The End!