Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013838.1 Corchorus olitorius cultivar O-4 contig13871, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9396

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--32
2
15.5
2
100
0
62
48
0
0
51
1.00
1248--1361
38
2.9
39
88
7
171
50
5
15
28
1.65
5985--6022
18
2.2
17
95
4
67
44
0
23
31
1.54
5989--6022
9
3.9
9
92
3
52
47
0
26
26
1.53
7299--7439
49
2.9
47
79
11
160
27
16
5
50
1.67
8260--8304
17
2.8
17
86
6
58
42
15
24
17
1.88

Tables:   1

The End!