Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013849.1 Corchorus olitorius cultivar O-4 contig13882, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33889

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
652--691
21
2.1
19
86
13
55
20
27
15
37
1.92
1898--2037
65
2.2
65
94
0
244
27
4
30
37
1.76
2640--3278
226
2.9
217
86
5
881
36
7
19
36
1.80
11904--11945
19
2.2
19
100
0
84
16
42
9
30
1.80
13702--13741
21
1.9
21
84
0
53
27
0
37
35
1.57
32102--32182
30
2.5
33
75
17
89
44
6
1
48
1.35
32240--32302
23
2.9
22
81
11
76
50
20
12
15
1.77
32240--32292
11
4.9
10
84
8
61
52
20
11
15
1.72
33650--33697
26
1.9
25
84
16
64
54
2
0
43
1.12
33794--33854
29
2.1
30
84
3
79
42
4
3
49
1.40

Tables:   1

The End!