Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013858.1 Corchorus olitorius cultivar O-4 contig13891, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10948

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4852--4923
22
3.2
22
76
2
63
40
13
9
36
1.78
4905--4959
23
2.5
22
88
8
85
40
25
1
32
1.66
4892--5142
22
11.7
21
73
13
140
35
17
7
39
1.80
4875--5897
44
23.8
44
67
15
294
35
17
9
38
1.81
5248--5666
22
18.9
22
70
14
236
34
16
9
39
1.81
5248--5901
66
9.6
66
71
15
345
35
17
9
38
1.81
5666--5898
22
10.5
22
75
9
195
37
17
9
36
1.81
6064--6102
20
2.0
20
85
10
53
64
2
5
28
1.28
10147--10183
2
18.5
2
88
0
56
51
5
0
43
1.24

Tables:   1

The End!