Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013859.1 Corchorus olitorius cultivar O-4 contig13892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1776

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76--803
44
16.4
44
65
17
186
39
9
16
34
1.81
88--149
22
2.8
22
90
0
106
32
8
16
43
1.77
251--355
22
4.8
22
76
9
99
44
9
11
34
1.73
252--451
22
9.1
22
69
15
94
43
9
13
35
1.75
584--810
126
1.8
124
84
7
316
42
9
15
32
1.79
544--885
22
15.9
22
67
15
160
42
9
14
33
1.79
1485--1552
27
2.6
26
84
9
84
13
14
44
27
1.83
1655--1776
23
5.5
23
88
7
198
13
16
44
25
1.85
1653--1776
42
2.8
45
92
4
200
14
16
43
25
1.86

Tables:   1

The End!