Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013869.1 Corchorus olitorius cultivar O-4 contig13902, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45064

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
556--599
16
2.7
16
89
3
61
4
11
38
45
1.61
6229--6257
15
1.9
15
100
0
58
20
0
34
44
1.52
6417--6456
20
2.0
20
85
9
55
12
7
15
65
1.47
28325--28414
26
3.3
26
77
13
92
35
26
17
20
1.95
28319--28387
26
2.5
27
86
9
95
34
27
18
18
1.95
29662--29724
31
2.0
33
84
12
87
46
6
22
25
1.75
34170--34249
41
1.9
42
94
2
144
55
20
5
20
1.62

Tables:   1

The End!