Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013870.1 Corchorus olitorius cultivar O-4 contig13903, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7427

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
315--373
31
1.9
31
96
0
109
22
32
0
45
1.52
2033--2084
25
2.1
25
100
0
104
11
11
26
50
1.73
6261--6479
22
10.0
22
75
11
182
41
17
10
30
1.83
6269--6479
43
4.8
44
78
9
164
40
18
10
30
1.84
6260--6472
87
2.5
86
81
9
229
41
17
10
30
1.83
6261--6479
65
3.3
66
79
6
196
41
17
10
30
1.83

Tables:   1

The End!