Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013881.1 Corchorus olitorius cultivar O-4 contig13914, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23410

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
671--994
178
1.8
178
87
2
481
34
14
15
35
1.88
1430--1493
31
2.1
31
87
0
92
29
3
18
48
1.64
3221--3311
43
2.1
43
100
0
182
54
10
8
25
1.63
3442--3538
3
33.0
3
89
8
155
64
1
0
34
1.00
7263--7295
12
2.8
12
86
4
50
9
12
9
69
1.36
14526--14597
32
2.2
32
87
7
101
25
22
1
51
1.56

Tables:   1

The End!