Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013886.1 Corchorus olitorius cultivar O-4 contig13919, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48107

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5784--5815
16
1.9
17
93
6
57
81
0
9
9
0.88
12822--13237
50
8.3
50
94
1
717
29
12
26
32
1.92
13898--14047
51
3.0
51
92
1
239
36
14
15
33
1.88
15111--15145
16
2.2
16
90
10
54
2
14
0
82
0.77
18928--18961
14
2.4
15
90
9
54
17
14
5
61
1.52
26243--26319
27
2.8
28
84
5
102
44
23
14
18
1.86
26243--26347
29
3.7
29
83
2
106
41
22
13
21
1.88
37670--37769
35
2.8
33
72
21
92
38
20
16
26
1.92
38454--38620
81
2.1
81
97
0
316
52
27
6
13
1.64
38490--38616
39
3.2
39
67
18
116
52
26
5
14
1.64
38498--38633
42
3.3
41
67
18
120
54
25
5
13
1.62
43966--44154
52
3.6
52
89
1
297
40
14
17
26
1.88
44212--44260
14
3.0
17
88
11
68
24
0
14
61
1.33
44212--44239
7
4.0
7
100
0
56
14
0
14
71
1.15
48024--48065
15
2.7
15
96
3
75
11
7
14
66
1.43

Tables:   1

The End!