Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013904.1 Corchorus olitorius cultivar O-4 contig13937, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52314

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8900--8965
27
2.4
27
92
0
105
40
24
18
16
1.90
11429--11580
76
2.0
76
81
10
177
26
26
29
16
1.97
30784--30809
13
2.0
13
100
0
52
53
30
0
15
1.42
35805--35848
21
2.0
22
87
12
65
36
22
15
25
1.94
36283--36331
22
2.3
22
78
3
55
12
53
0
34
1.39
37083--37114
1
32.0
1
93
0
55
96
3
0
0
0.20
46366--46416
3
17.0
3
100
0
102
33
0
0
66
0.92

Tables:   1

The End!