Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013912.1 Corchorus olitorius cultivar O-4 contig13945, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13539

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5369--5401
2
16.5
2
100
0
66
48
0
51
0
1.00
11202--11243
21
2.0
21
85
0
57
23
19
7
50
1.72
13276--13333
22
2.7
21
80
17
73
60
1
0
37
1.07
13257--13337
10
8.7
10
67
17
50
54
2
0
43
1.13
13276--13331
7
7.7
7
74
21
53
58
1
0
39
1.08
13297--13338
18
2.4
17
88
11
59
61
0
0
38
0.96
13433--13470
11
3.5
11
85
7
51
36
0
0
63
0.95
13430--13474
18
2.6
18
89
3
65
37
0
0
62
0.96
13445--13515
37
1.9
36
86
11
99
46
0
1
52
1.09

Tables:   1

The End!