Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013913.1 Corchorus olitorius cultivar O-4 contig13946, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24192

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18--73
7
7.7
7
74
21
53
39
0
1
58
1.08
15--73
22
2.7
22
80
17
77
38
0
1
59
1.08
169--224
29
2.0
28
92
3
94
28
10
21
39
1.87
1195--1315
47
2.5
48
86
2
163
52
19
6
21
1.68
1927--2018
46
2.0
46
95
0
166
35
11
19
32
1.88
6078--6102
13
1.9
13
100
0
50
92
0
8
0
0.40
8331--8362
3
10.7
3
100
0
64
0
31
0
68
0.90
17310--17350
22
2.0
22
90
9
68
21
24
19
34
1.97
17904--18061
84
1.9
81
90
3
253
43
8
10
37
1.70
18745--18794
26
2.0
25
88
11
77
44
12
18
26
1.84
19887--19916
2
15.5
2
93
6
53
50
0
0
50
1.00
20468--20548
2
41.5
2
82
4
94
46
3
0
49
1.19
21150--21224
15
5.3
15
71
18
61
34
0
14
50
1.43
21128--21239
41
2.6
42
85
7
163
37
0
15
47
1.45

Tables:   1

The End!