Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013916.1 Corchorus olitorius cultivar O-4 contig13949, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10258

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
429--669
35
6.7
35
84
7
288
38
17
16
27
1.91
4711--4737
12
2.2
12
100
0
54
14
29
25
29
1.95
7944--7995
24
2.2
24
100
0
104
15
7
23
53
1.67
9874--9920
22
2.1
22
84
7
60
61
2
12
23
1.42
9813--9981
93
1.8
93
97
0
320
52
1
13
32
1.50
10009--10074
31
2.3
28
85
14
98
48
7
19
24
1.75
10017--10075
31
1.9
31
100
0
118
45
6
23
23
1.76
10211--10247
2
18.5
2
100
0
74
48
0
0
51
1.00

Tables:   1

The End!