Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013933.1 Corchorus olitorius cultivar O-4 contig13966, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14335

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
536--631
34
2.8
34
87
0
129
39
18
15
26
1.91
4306--4337
13
2.3
15
89
10
50
81
0
18
0
0.70
4378--4493
46
2.5
45
80
8
144
43
7
22
26
1.80
4957--5006
22
2.3
22
86
6
66
26
14
34
26
1.94
4966--5008
22
2.0
22
95
0
77
25
13
32
27
1.94
13445--13473
7
4.1
7
100
0
58
41
13
0
44
1.44
13599--13635
6
6.2
6
100
0
74
16
35
32
16
1.91

Tables:   1

The End!