Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013947.1 Corchorus olitorius cultivar O-4 contig13980, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23938

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
477--508
2
16.0
2
100
0
64
50
0
0
50
1.00
751--820
36
1.9
36
97
0
131
27
30
17
25
1.97
856--903
22
2.2
22
100
0
96
43
16
22
16
1.87
11434--11530
23
4.4
21
76
16
90
17
17
41
23
1.90
11453--11535
42
2.0
42
100
0
166
16
15
43
24
1.87
11914--12101
60
3.0
60
78
17
209
11
19
26
42
1.86
11962--12170
70
2.9
70
83
12
237
11
18
29
41
1.85
12118--12281
78
2.1
79
85
5
217
15
18
21
44
1.86
13686--14087
127
3.2
127
90
1
603
12
29
29
28
1.93

Tables:   1

The End!