Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013955.1 Corchorus olitorius cultivar O-4 contig13988, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35166

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2740--2786
24
2.0
24
91
0
76
27
27
6
38
1.81
5523--5560
1
38.0
1
100
0
76
0
0
0
100
0.00
7084--7337
132
1.9
131
87
8
374
38
10
1
49
1.48
19194--19224
2
15.5
2
93
0
53
48
0
3
48
1.17
19551--19624
27
2.6
29
85
8
107
41
10
8
39
1.70
20649--20682
2
17.0
2
100
0
68
50
0
0
50
1.00
29021--29084
31
2.1
31
93
0
110
29
20
6
43
1.76
30700--30768
21
3.5
20
72
20
72
24
8
17
49
1.75
30700--30752
18
2.8
18
74
8
52
24
9
15
50
1.73
30733--30785
21
2.4
22
81
9
63
18
11
16
52
1.73
31211--31265
28
2.0
27
85
3
74
65
0
12
21
1.26

Tables:   1

The End!