Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013956.1 Corchorus olitorius cultivar O-4 contig13989, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14562

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3984--4017
15
2.3
15
89
0
50
50
2
5
41
1.42
4606--4646
20
2.0
21
85
4
57
36
4
0
58
1.20
8842--8899
19
2.9
19
82
5
62
39
10
15
34
1.81
8842--8900
21
2.9
21
82
5
68
38
10
15
35
1.81
8950--8986
19
1.9
19
100
0
74
37
13
32
16
1.87
10010--10043
15
2.3
15
89
0
50
32
0
14
52
1.42
12063--12123
6
10.5
6
87
5
81
80
0
19
0
0.72

Tables:   1

The End!