Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013958.1 Corchorus olitorius cultivar O-4 contig13991, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35299

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8153--8193
19
2.0
21
86
9
59
36
9
2
51
1.48
10666--11003
141
2.5
136
84
6
398
20
18
16
43
1.88
10668--11045
67
5.5
68
84
6
405
20
19
17
42
1.89
11076--11231
66
2.4
65
79
9
165
23
23
15
37
1.93
18845--18898
18
3.3
15
77
22
56
24
3
14
57
1.54
28375--28414
15
2.6
16
92
4
64
65
12
10
12
1.49
31545--31575
16
1.9
16
100
0
62
58
19
6
16
1.59
33685--33724
15
2.6
16
92
4
64
65
12
10
12
1.49
34220--34255
19
1.9
18
88
5
54
41
8
22
27
1.82
35089--35122
15
2.2
16
90
10
54
11
14
8
64
1.49

Tables:   1

The End!