Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013960.1 Corchorus olitorius cultivar O-4 contig13993, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14178

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7105--7146
19
2.2
19
95
0
75
50
11
16
21
1.77
8337--8361
13
1.9
13
100
0
50
72
8
12
8
1.29
8647--8681
12
2.9
12
95
0
61
2
8
37
51
1.47
10461--10505
20
2.2
20
84
0
54
40
11
26
22
1.87
11597--12207
202
3.0
202
95
1
1084
45
8
10
35
1.69
12318--12383
17
3.3
21
70
20
68
34
3
10
51
1.52
12315--12395
39
2.0
40
90
2
128
35
3
8
51
1.50

Tables:   1

The End!