Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013965.1 Corchorus olitorius cultivar O-4 contig13998, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9853

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
897--1037
49
2.9
47
79
11
160
27
16
5
50
1.67
1673--1821
78
1.9
77
91
1
244
32
19
32
16
1.94
2086--2129
15
2.9
15
72
0
52
59
4
0
36
1.18
2188--2248
30
2.0
30
83
6
77
73
3
1
21
1.06
9439--9603
82
2.0
82
98
0
321
20
26
16
37
1.93
9795--9823
14
2.1
14
100
0
58
58
0
27
13
1.36

Tables:   1

The End!