Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013968.1 Corchorus olitorius cultivar O-4 contig14001, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17797

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
134--223
45
2.0
45
93
0
153
40
20
5
34
1.75
1824--1888
3
21.7
3
96
0
121
69
0
30
0
0.89
3221--3262
12
3.3
12
86
6
57
30
0
7
61
1.22
3221--3262
13
3.3
13
86
6
59
30
0
7
61
1.22
7606--7645
20
2.0
20
85
0
53
60
0
5
35
1.19
8117--8157
3
13.7
3
100
0
82
65
0
0
34
0.93
9404--9524
2
60.5
2
98
0
233
49
0
50
0
1.00
10943--10978
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!