Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013970.1 Corchorus olitorius cultivar O-4 contig14003, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65054

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28--76
23
2.2
23
85
3
64
48
2
10
38
1.48
2565--2594
12
2.4
13
94
5
53
16
6
10
66
1.41
20489--20530
15
2.7
15
96
3
75
66
14
7
11
1.43
22633--22667
9
3.7
9
92
7
52
54
31
11
2
1.51
28934--29024
27
3.4
27
90
0
119
17
18
27
36
1.94
37367--37391
13
1.9
13
100
0
50
8
8
8
76
1.18
38350--38452
30
3.4
30
95
2
181
16
13
35
33
1.88
39629--39658
15
2.1
14
93
6
51
13
16
6
63
1.50
41312--41347
19
1.9
18
88
5
54
41
2
22
33
1.68
45529--45558
14
2.1
14
93
0
51
73
3
3
20
1.12
45853--45888
18
2.0
18
88
0
54
47
5
11
36
1.63
46739--46774
19
1.9
18
88
5
54
41
2
22
33
1.68
55011--55156
50
2.9
50
88
2
222
36
11
28
23
1.90
55428--55517
27
3.3
27
93
0
144
15
18
27
37
1.92

Tables:   1

The End!