Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013972.1 Corchorus olitorius cultivar O-4 contig14005, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45114

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7378--8294
457
2.0
458
96
0
1703
39
15
15
29
1.88
9485--9529
21
2.1
21
87
0
63
15
20
31
33
1.93
12790--13066
149
1.9
149
89
1
439
17
19
16
47
1.83
16865--16935
36
2.0
36
91
0
115
35
25
22
16
1.95
18127--18154
14
2.0
14
100
0
56
50
0
28
21
1.49
18850--18941
45
2.0
45
100
0
184
31
28
20
19
1.97
19413--19457
13
3.4
13
75
6
54
48
15
2
33
1.57
19518--19558
21
2.0
21
95
0
73
9
24
24
41
1.85
19668--19752
27
3.2
26
88
3
107
31
11
18
37
1.87
22215--22286
31
2.3
31
75
17
78
61
8
4
26
1.43
24498--24715
109
2.0
109
97
0
409
43
14
11
31
1.80
25643--25672
15
2.1
15
93
6
53
66
6
13
13
1.43
29977--30023
20
2.3
20
100
0
94
34
42
4
19
1.70
38334--38699
193
1.9
198
87
4
553
32
15
18
33
1.92
39873--39901
11
2.6
11
100
0
58
65
0
17
17
1.27
40149--40190
21
2.0
21
95
0
75
33
26
19
21
1.97

Tables:   1

The End!