Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013974.1 Corchorus olitorius cultivar O-4 contig14007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19842

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
691--732
11
3.9
11
82
14
52
47
28
16
7
1.73
1978--2022
20
2.4
19
81
7
56
24
8
20
46
1.78
2708--2769
29
2.1
29
100
0
124
16
9
29
45
1.79
2748--2797
20
2.5
20
93
3
84
12
12
22
54
1.69
8895--8986
46
2.0
46
97
0
175
22
21
11
43
1.85
9388--9431
20
2.3
18
80
7
52
52
4
38
4
1.42
11862--11919
30
1.9
30
89
0
89
37
34
8
18
1.82
13272--13296
2
12.5
2
100
0
50
48
0
0
52
1.00
13390--13431
17
2.4
18
88
4
59
59
2
0
38
1.10
15480--15521
21
2.0
21
100
0
84
38
9
23
28
1.86
16128--17133
437
2.3
438
82
4
1168
41
13
14
30
1.84
18199--18250
27
1.9
27
84
7
70
36
3
15
44
1.65

Tables:   1

The End!