Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013978.1 Corchorus olitorius cultivar O-4 contig14011, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12142

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
163--266
31
3.4
31
74
5
104
26
21
15
36
1.93
194--296
29
3.5
29
69
5
89
30
22
14
33
1.94
161--327
60
2.8
60
86
1
228
28
20
16
34
1.94
157--330
31
5.7
31
69
12
101
28
21
17
32
1.96
1842--1886
24
1.9
23
82
13
56
57
0
2
40
1.11
7088--7140
25
2.1
25
100
0
106
50
7
7
33
1.59

Tables:   1

The End!