Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013982.1 Corchorus olitorius cultivar O-4 contig14015, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10168

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5881--5916
16
2.2
17
90
5
56
83
11
0
5
0.80
5908--5975
6
11.7
6
74
12
52
69
16
1
13
1.27
5906--5975
23
3.0
23
87
2
95
70
15
1
12
1.25
5889--5963
18
4.2
17
80
12
73
72
16
1
10
1.19
7644--7829
38
4.9
38
93
1
284
23
19
34
21
1.96
7859--7884
6
4.3
6
100
0
52
15
0
34
50
1.45
8729--8915
50
3.7
50
85
4
252
34
19
14
31
1.92
9254--9319
25
2.5
26
80
14
73
50
18
24
7
1.72
9551--9637
31
3.2
31
58
35
72
29
24
12
33
1.92
9528--9912
50
7.7
50
92
1
601
31
27
11
29
1.92
9528--9909
201
1.9
200
92
1
640
31
27
11
29
1.92
9923--10168
50
4.9
50
93
1
438
34
11
26
26
1.91
9920--10168
101
2.5
101
94
0
437
34
12
26
26
1.91

Tables:   1

The End!