Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013986.1 Corchorus olitorius cultivar O-4 contig14019, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44322

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
416--549
21
6.4
21
94
1
200
26
26
17
29
1.97
3889--3928
15
2.6
16
92
4
64
65
12
7
15
1.47
8530--8587
23
2.5
23
80
8
64
36
3
0
60
1.14
9745--9835
42
2.2
42
96
2
166
32
4
20
41
1.72
10032--10075
7
6.4
7
89
5
63
34
0
0
65
0.93
10030--10079
21
2.2
23
89
10
77
36
0
0
64
0.94
26802--26846
2
22.5
2
100
0
90
51
0
0
48
1.00
42112--42241
65
2.0
65
93
0
224
19
30
26
23
1.98
42431--42472
21
2.0
21
90
0
66
35
30
14
19
1.91

Tables:   1

The End!