Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013987.1 Corchorus olitorius cultivar O-4 contig14020, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7891

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
810--853
23
1.9
23
85
0
61
11
18
0
70
1.16
908--1011
33
3.2
32
83
6
129
11
36
41
10
1.76
1888--2030
73
2.0
73
81
0
169
41
17
22
18
1.90
2597--2756
60
2.7
59
82
4
196
38
18
15
28
1.91
2808--2876
31
2.2
31
87
5
95
26
17
17
39
1.91
5848--5901
25
2.1
26
93
6
92
42
3
9
44
1.54
6063--6471
211
1.9
213
90
3
660
27
18
18
35
1.95
6929--6963
11
3.2
11
83
0
52
77
8
5
8
1.13
7006--7090
42
2.0
42
95
0
152
28
12
9
49
1.72
7672--7745
28
2.5
30
86
6
98
32
17
10
39
1.84

Tables:   1

The End!