Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013993.1 Corchorus olitorius cultivar O-4 contig14026, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29636

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1748--1794
21
2.2
21
88
3
67
31
10
12
44
1.77
2222--2263
15
2.7
15
96
3
75
66
14
7
11
1.43
4266--4366
39
2.6
37
86
6
139
47
6
17
27
1.73
9480--9582
28
3.7
28
90
0
161
36
25
18
19
1.94
11015--11192
71
2.5
72
85
5
220
29
15
28
26
1.96
12052--12171
31
4.0
31
80
10
124
17
20
29
33
1.95
12088--12178
28
3.1
28
82
7
94
17
18
31
31
1.94
26308--26347
18
2.2
19
86
13
57
30
22
2
45
1.66
26298--26358
30
2.0
30
81
6
70
32
19
3
44
1.67

Tables:   1

The End!