Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013994.1 Corchorus olitorius cultivar O-4 contig14027, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17545

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3069--3371
59
5.1
59
89
6
441
44
16
15
23
1.85
3068--3371
121
2.5
119
88
6
436
45
16
15
23
1.85
3855--3883
2
14.5
2
100
0
58
51
48
0
0
1.00
3883--3908
2
13.0
2
100
0
52
50
0
0
50
1.00
4251--4372
36
3.3
37
81
7
140
10
21
9
58
1.60
14406--14439
11
3.1
11
100
0
68
38
8
44
8
1.67
16634--16738
33
3.2
31
80
11
111
43
23
8
23
1.81

Tables:   1

The End!