Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013996.1 Corchorus olitorius cultivar O-4 contig14029, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7693

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
812--1501
35
19.4
36
81
4
715
18
21
18
41
1.91
812--1502
71
9.7
71
82
4
748
19
21
18
40
1.91
812--1497
249
2.8
248
88
1
980
18
21
18
40
1.91
1830--2576
30
24.8
30
88
1
955
22
15
17
44
1.85
1829--2537
241
2.9
239
89
1
1053
22
15
17
45
1.85
2965--3039
28
2.7
28
85
6
91
16
14
24
45
1.84
3573--3607
13
2.8
13
86
4
54
8
22
8
60
1.54
4985--5018
17
2.0
17
100
0
68
17
35
17
29
1.93
6485--6513
13
2.1
14
93
6
51
27
20
10
41
1.85
6525--6564
17
2.3
18
83
12
57
72
7
12
7
1.27

Tables:   1

The End!