Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014001.1 Corchorus olitorius cultivar O-4 contig14034, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23532

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5441--5563
60
2.0
61
96
1
230
34
7
12
46
1.69
14977--15003
1
27.0
1
100
0
54
0
0
0
100
0.00
15252--15318
34
2.0
34
81
0
80
40
10
7
41
1.67
15716--15753
2
19.0
2
100
0
76
50
0
0
50
1.00
15857--15939
22
3.8
22
76
9
62
45
6
9
38
1.62
15923--15980
22
2.6
22
86
8
73
31
15
10
43
1.80
17418--17480
27
2.3
26
82
15
67
47
1
4
46
1.33
17519--17558
18
2.2
18
95
0
71
25
10
2
62
1.39
20193--20334
49
3.0
49
81
8
159
26
18
6
49
1.71

Tables:   1

The End!