Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014003.1 Corchorus olitorius cultivar O-4 contig14036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30837

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1288--1362
28
2.7
28
77
6
73
25
21
14
38
1.91
18441--18491
23
2.2
23
89
0
75
49
15
9
25
1.75
24552--24599
24
2.0
24
95
0
87
47
12
4
35
1.60
27656--27697
15
2.8
15
78
7
50
14
35
7
42
1.73
29173--29216
23
1.9
23
81
9
54
61
0
13
25
1.32
29175--29364
97
1.9
99
87
8
278
51
2
12
34
1.53

Tables:   1

The End!