Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014006.1 Corchorus olitorius cultivar O-4 contig14039, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18931

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10790--10840
19
2.7
19
77
14
61
47
0
1
50
1.12
10794--10845
16
3.1
16
73
15
52
50
0
1
48
1.12
18239--18399
62
2.7
60
81
5
164
38
16
16
28
1.90
18256--18399
62
2.4
61
84
2
182
37
16
16
29
1.91
18447--18583
60
2.3
60
88
0
202
28
16
16
37
1.91
18426--18546
31
4.1
31
68
11
92
26
17
19
37
1.93
18672--18712
21
2.0
21
85
0
55
19
43
7
29
1.78

Tables:   1

The End!