Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014009.1 Corchorus olitorius cultivar O-4 contig14042, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6729

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45--189
72
2.0
72
94
0
254
46
17
22
13
1.83
117--703
288
2.0
289
94
0
1032
34
22
19
23
1.96
397--2012
453
3.5
453
93
1
2748
34
21
17
25
1.96
1924--1954
2
16.0
2
93
6
55
51
0
0
48
1.00
1990--2036
24
2.0
24
95
0
85
29
29
17
23
1.97
6037--6078
15
2.6
17
85
11
61
23
9
0
66
1.21
6047--6084
15
2.6
15
87
4
60
21
5
0
73
1.02

Tables:   1

The End!